There are 27 ligand heavy atoms Ligand center of coords (x y z): 0.375 0.171555555555556 16.5933333333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 846 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 634 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 623 Number of spheres polar: 217, nonpolar: 237, out of current total: 623 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.11912 12.34718 -11.73982 12.08009 7.01758 28.59196 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 246 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 202 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 0.375 0.171555555555556 16.5933333333333 Center point: 64 xyz: -0.06820 0.32835 15.39747 After continuity checking, number of spheres is: 164 Spheres center of coords (x y z): -0.989016524390244 2.80928225609756 16.5027785365854 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 12.9625941286114 4.67806989748369 16.2133373718546 Average weighted-distance for final elimination is: 34.6195276988898 Final number of output spheres is: 120 Number of polar spheres: 45 Number of nonpolar spheres: 28 Number of spheres that are near neither polar nor nonpolar receptor atoms: 47 Final number of spheres that are from crystallographic ligand: 0