There are 27 ligand heavy atoms Ligand center of coords (x y z): 7.53125925925926 32.6698518518519 -0.735111111111111 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 11892 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8463 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8463 Number of spheres polar: 5242, nonpolar: 2450, out of current total: 8463 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.46860 19.53080 20.67560 44.66240 -12.69420 11.26460 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1017 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 599 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 570 Spheres center of coords (x y z): 6.51254947368422 28.6568431578947 -1.4470550877193 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.39984213333419 Final number of output spheres is: 120 Number of polar spheres: 82 Number of nonpolar spheres: 36 Number of spheres that are near neither polar nor nonpolar receptor atoms: 2 Final number of spheres that are from crystallographic ligand: 27