usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): -4.77558333333333 -4.57854166666667 15.572875
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1243
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 859
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 859
Number of spheres polar: 215, nonpolar: 276, out of current total: 859
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.68814 5.21029 -14.55029 4.88617 5.61799 25.56896
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 347
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 293
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 284
Spheres center of coords (x y z): -4.92457496478873 -5.90968834507042 17.5972338380282
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.60130139352602
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 11
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 24