There are 10 ligand heavy atoms Ligand center of coords (x y z): -2.1738 -3.0507 20.5687 useligsph not on Starting number of spheres from sph/sph cluster 0: 826 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 586 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 586 Number of spheres polar: 353, nonpolar: 211, out of current total: 586 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.15590 9.62026 -14.91371 8.68436 11.28920 28.69020 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 182 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 125 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.1738 -3.0507 20.5687 Center point: 25 xyz: -2.10900 -3.35557 19.62765 Only 27 spheres are continuous, so increasing continuity by 0.5 to be 3.5 Only 27 spheres are continuous, so increasing continuity by 0.5 to be 4 After continuity checking, number of spheres is: 89 Final number of output spheres is: 89 Number of polar spheres: 57 Number of nonpolar spheres: 28 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 0