usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): -5.022 -4.69754166666667 15.5109583333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1219
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 854
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 854
Number of spheres polar: 182, nonpolar: 263, out of current total: 854
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.88100 4.90826 -14.64300 4.66963 5.55860 25.50991
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 535
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 487
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 485
Spheres center of coords (x y z): -5.09671608247423 -5.61806334020619 17.8383791546392
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.61802115865078
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 14
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 24