There are 20 ligand heavy atoms Ligand center of coords (x y z): -7.66085 14.62215 19.7517 useligsph not on Starting number of spheres from sph/sph cluster 0: 1216 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 919 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 919 Number of spheres polar: 500, nonpolar: 346, out of current total: 919 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -19.65729 4.30989 2.66357 26.45170 7.76016 31.74639 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 289 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 198 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -7.66085 14.62215 19.7517 Center point: 70 xyz: -7.64620 14.46652 20.11256 After continuity checking, number of spheres is: 143 Spheres center of coords (x y z): -8.51457853146853 11.9102036363636 26.925963986014 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -5.89579348556077 12.574356615178 15.4790960376091 Average weighted-distance for final elimination is: 30.6717348415116 Final number of output spheres is: 120 Number of polar spheres: 82 Number of nonpolar spheres: 34 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 0