There are 22 ligand heavy atoms Ligand center of coords (x y z): 0.393 43.1499545454545 2.053 useligsph not on Starting number of spheres from sph/sph cluster 0: 853 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 674 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 641 Number of spheres polar: 234, nonpolar: 282, out of current total: 641 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.48288 11.50546 31.20290 49.44828 -9.70176 13.85582 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 227 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 183 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 0.393 43.1499545454545 2.053 Center point: 113 xyz: 0.44016 43.20604 1.11895 After continuity checking, number of spheres is: 143 Spheres center of coords (x y z): 1.18823741258741 40.4122444055944 4.28442748251748 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 3.49020094086022 26.8468329973119 1.1700184811828 Average weighted-distance for final elimination is: 30.4461662223385 Final number of output spheres is: 120 Number of polar spheres: 33 Number of nonpolar spheres: 51 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0