usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): 0.0995454545454546 42.8202272727273 2.08727272727273
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 935
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 536
WARNING: removing a crystallographic sphere that is distance 7.44364346271367 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 508
Number of spheres polar: 135, nonpolar: 253, out of current total: 508
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.88491 9.87823 32.84243 50.87200 -7.85397 12.04084
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 202
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 171
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 142
Spheres center of coords (x y z): 0.81119661971831 41.1373773239437 4.25616830985916
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.06909687006395
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 21