There are 21 ligand heavy atoms Ligand center of coords (x y z): -25.8841904761905 29.9649523809524 -40.7839523809524 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 762 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 591 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 584 Number of spheres polar: 245, nonpolar: 204, out of current total: 584 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -37.86145 -13.97950 18.03225 40.70403 -52.63306 -28.79425 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 210 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 163 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -25.8841904761905 29.9649523809524 -40.7839523809524 Center point: 67 xyz: -26.51389 30.59489 -40.08302 After continuity checking, number of spheres is: 86 Final number of output spheres is: 86 Number of polar spheres: 23 Number of nonpolar spheres: 25 Number of spheres that are near neither polar nor nonpolar receptor atoms: 38 Final number of spheres that are from crystallographic ligand: 0