There are 24 ligand heavy atoms Ligand center of coords (x y z): 10.1530416666667 -27.0006666666667 -10.16825 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12917 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9863 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9863 Number of spheres polar: 3303, nonpolar: 5301, out of current total: 9863 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.84240 22.15180 -39.00040 -15.00840 -22.15140 1.79200 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1414 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 820 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 810 Spheres center of coords (x y z): 9.91617950617284 -26.2564108641975 -13.2861580246914 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 11.072114854442 Final number of output spheres is: 120 Number of polar spheres: 44 Number of nonpolar spheres: 58 Number of spheres that are near neither polar nor nonpolar receptor atoms: 18 Final number of spheres that are from crystallographic ligand: 24