usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): -9.66456097560975 16.1790975609756 1.86014634146342
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1412
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 735
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 735
Number of spheres polar: 184, nonpolar: 378, out of current total: 735
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -18.79932 0.32243 6.20655 26.14253 -8.13101 11.63713
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 254
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 216
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 206
Spheres center of coords (x y z): -9.4863954368932 14.9161091262136 1.85211640776699
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.09297366832181
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 41