usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -12.5650263157895 13.2629210526316 35.6463157894737
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1347
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 735
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 730
Number of spheres polar: 165, nonpolar: 431, out of current total: 730
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -22.50510 -2.60968 3.29516 23.25517 25.67794 45.57681
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 401
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 360
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 339
Spheres center of coords (x y z): -12.3252803244838 12.8683673746313 33.289690619469
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.52995723990722
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 38