There are 54 ligand heavy atoms Ligand center of coords (x y z): -9.16412962962963 15.9127037037037 27.8320740740741 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1195 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 863 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 862 Number of spheres polar: 189, nonpolar: 452, out of current total: 862 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.10999 2.81515 4.00689 27.70873 15.96853 39.81192 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 331 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 275 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -9.16412962962963 15.9127037037037 27.8320740740741 Center point: 213 xyz: -9.10079 16.40589 28.11117 After continuity checking, number of spheres is: 232 Spheres center of coords (x y z): -8.0560474137931 13.320652887931 28.2942669827586 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.8733275299238 20.3959096844396 27.8803988030468 Average weighted-distance for final elimination is: 27.6204934537839 Final number of output spheres is: 120 Number of polar spheres: 34 Number of nonpolar spheres: 64 Number of spheres that are near neither polar nor nonpolar receptor atoms: 22 Final number of spheres that are from crystallographic ligand: 0