usefragsph not on There are 42 ligand heavy atoms Ligand center of coords (x y z): 11.6867380952381 24.3402619047619 5.74588095238095 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 1336 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 878 WARNING: removing a crystallographic sphere that is distance 25.0488989179165 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.1680679646014 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.1412519634967 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.0352182263666 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.8732931562625 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.9745432492307 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.7197668460613 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.7126505885961 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.0381590669932 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.766825964486 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.6578679221664 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.102146999829 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.0238449003701 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.2508908240416 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.2474141117377 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.8747972552443 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.1366335605579 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.3853145481955 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.8155543295305 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.2721781675025 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.5122715159631 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.0565154108631 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.8418330554769 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.2134199451254 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.0564300973124 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.240661831167 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.0791521595649 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.1972543217796 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.1687043673415 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.2332880130182 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.876071620657 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.6315862889586 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.8197622127595 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.0965091033272 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.3878243258456 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 31.0427462380505 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.827894863701 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.0656779884967 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.1551907899777 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.302378705893 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.0662899193813 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.7308178999502 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 0 Number of spheres polar: 0, nonpolar: 0, out of current total: 0 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 1 Crystallographic spheres are present, so doing continuity based on crystallographic spheres Only 0 spheres are continuous, so increasing continuity by 0.5 to be 3.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 5 After continuity checking, number of spheres is: 0 Final number of output spheres is: 0 Number of polar spheres: 0 Number of nonpolar spheres: 0 Number of spheres that are near neither polar nor nonpolar receptor atoms: 0 Final number of spheres that are from crystallographic ligand: 0