There are 49 ligand heavy atoms Ligand center of coords (x y z): 40.3154489795918 -0.70195918367347 81.2997551020408 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1691 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1200 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1198 Number of spheres polar: 275, nonpolar: 534, out of current total: 1198 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.32454 51.32793 -12.65219 11.25292 69.37848 93.28033 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 438 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 347 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 40.3154489795918 -0.70195918367347 81.2997551020408 Center point: 101 xyz: 40.69421 -0.93131 81.13770 After continuity checking, number of spheres is: 315 Spheres center of coords (x y z): 39.0074333333333 0.407649301587301 81.7799225714286 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 45.6291206709957 -0.00447402597403447 83.2911055194805 Average weighted-distance for final elimination is: 30.5071146859442 Final number of output spheres is: 120 Number of polar spheres: 42 Number of nonpolar spheres: 50 Number of spheres that are near neither polar nor nonpolar receptor atoms: 28 Final number of spheres that are from crystallographic ligand: 0