usefragsph not on There are 36 ligand heavy atoms Ligand center of coords (x y z): 15.4442222222222 21.7713888888889 5.81291666666667 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 1405 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 860 WARNING: removing a crystallographic sphere that is distance 25.6975510311781 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.4523111655674 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.2545435714051 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.0885665683272 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 30.2050254262432 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.8626538936979 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.045150128722 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.3070705514696 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.2241037159397 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.497103264558 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.1124841724251 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.9972158124673 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.5442251602667 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.480728860815 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.1023283776402 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.0803873125921 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 31.4564701293708 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 30.2315637868768 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.8467353382762 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.7565115252344 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.549413183085 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.1303491802004 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.1709266312358 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.4015752284426 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.2407719795334 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.4056174515954 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.0990947896903 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.6883798370363 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 32.4992337294281 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.2688052151264 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.238307919577 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.6731304869508 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.7814351423655 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.0403785846278 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.2660171704809 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.4812552194944 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 0 Number of spheres polar: 0, nonpolar: 0, out of current total: 0 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 1 Number of spheres after second pass removing spheres absolutely <0.5 from each other: 1 Crystallographic spheres are present, so doing continuity based on crystallographic spheres Only 0 spheres are continuous, so increasing continuity by 0.5 to be 3.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 5 After continuity checking, number of spheres is: 0 Final number of output spheres is: 0 Number of polar spheres: 0 Number of nonpolar spheres: 0 Number of spheres that are near neither polar nor nonpolar receptor atoms: 0 Final number of spheres that are from crystallographic ligand: 0