usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): -9.29753333333333 16.1293 27.9111333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1351
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 669
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 668
Number of spheres polar: 123, nonpolar: 379, out of current total: 668
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -18.06919 0.67613 6.13508 26.01120 17.96001 37.87946
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 381
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 330
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 313
Spheres center of coords (x y z): -8.24685143769967 15.6719272204473 27.6645314696486
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.02800464048335
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 30