There are 39 ligand heavy atoms Ligand center of coords (x y z): -8.97015384615385 16.6844358974359 27.1803846153846 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1323 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 886 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 886 Number of spheres polar: 230, nonpolar: 415, out of current total: 886 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -20.95109 3.00779 4.68513 28.34008 15.24685 39.15876 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 349 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 290 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -8.97015384615385 16.6844358974359 27.1803846153846 Center point: 31 xyz: -9.10787 16.72103 27.35530 After continuity checking, number of spheres is: 238 Spheres center of coords (x y z): -8.32882016806723 14.1607533613445 28.0506681512605 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.8523037837838 20.5130351351352 27.8142691891892 Average weighted-distance for final elimination is: 27.4441403296688 Final number of output spheres is: 120 Number of polar spheres: 41 Number of nonpolar spheres: 63 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 0