usefragsph not on
There are 80 ligand heavy atoms
Ligand center of coords (x y z): 12.659025 22.0973375 5.7479125
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1710
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1064
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1064
Number of spheres polar: 163, nonpolar: 633, out of current total: 1064
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.65000 22.64655 12.34798 31.26957 -4.14997 15.73716
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 355
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 301
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 80
Spheres center of coords (x y z): 12.659025 22.0973375 5.7479125
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.75356229770652
WARNING: removing a crystallographic sphere since 80>45 max spheres are present
WARNING: removing a crystallographic sphere since 79>45 max spheres are present
WARNING: removing a crystallographic sphere since 78>45 max spheres are present
WARNING: removing a crystallographic sphere since 77>45 max spheres are present
WARNING: removing a crystallographic sphere since 76>45 max spheres are present
WARNING: removing a crystallographic sphere since 75>45 max spheres are present
WARNING: removing a crystallographic sphere since 74>45 max spheres are present
WARNING: removing a crystallographic sphere since 73>45 max spheres are present
WARNING: removing a crystallographic sphere since 72>45 max spheres are present
WARNING: removing a crystallographic sphere since 71>45 max spheres are present
WARNING: removing a crystallographic sphere since 70>45 max spheres are present
WARNING: removing a crystallographic sphere since 69>45 max spheres are present
WARNING: removing a crystallographic sphere since 68>45 max spheres are present
WARNING: removing a crystallographic sphere since 67>45 max spheres are present
WARNING: removing a crystallographic sphere since 66>45 max spheres are present
WARNING: removing a crystallographic sphere since 65>45 max spheres are present
WARNING: removing a crystallographic sphere since 64>45 max spheres are present
WARNING: removing a crystallographic sphere since 63>45 max spheres are present
WARNING: removing a crystallographic sphere since 62>45 max spheres are present
WARNING: removing a crystallographic sphere since 61>45 max spheres are present
WARNING: removing a crystallographic sphere since 60>45 max spheres are present
WARNING: removing a crystallographic sphere since 59>45 max spheres are present
WARNING: removing a crystallographic sphere since 58>45 max spheres are present
WARNING: removing a crystallographic sphere since 57>45 max spheres are present
WARNING: removing a crystallographic sphere since 56>45 max spheres are present
WARNING: removing a crystallographic sphere since 55>45 max spheres are present
WARNING: removing a crystallographic sphere since 54>45 max spheres are present
WARNING: removing a crystallographic sphere since 53>45 max spheres are present
WARNING: removing a crystallographic sphere since 52>45 max spheres are present
WARNING: removing a crystallographic sphere since 51>45 max spheres are present
WARNING: removing a crystallographic sphere since 50>45 max spheres are present
WARNING: removing a crystallographic sphere since 49>45 max spheres are present
WARNING: removing a crystallographic sphere since 48>45 max spheres are present
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 45