usefragsph not on
There are 45 ligand heavy atoms
Ligand center of coords (x y z): 13.1979777777778 23.2807333333333 5.60106666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1297
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 828
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 828
Number of spheres polar: 163, nonpolar: 417, out of current total: 828
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.27773 23.15013 13.34000 33.01229 -4.34982 15.56753
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 469
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 408
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 392
Spheres center of coords (x y z): 12.8456930867347 21.7617718367347 6.61942757653062
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.83077336607438
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 45