There are 39 ligand heavy atoms Ligand center of coords (x y z): 5.78353846153846 -1.14712820512821 14.2918205128205 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1236 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 904 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 904 Number of spheres polar: 249, nonpolar: 377, out of current total: 904 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.06749 17.73477 -13.13651 10.38152 2.41242 26.20077 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 361 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 300 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 5.78353846153846 -1.14712820512821 14.2918205128205 Center point: 17 xyz: 5.23275 -1.99904 14.69480 After continuity checking, number of spheres is: 246 Spheres center of coords (x y z): 4.73901918699187 -3.98587634146341 12.7561526829268 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 5.07152896589063 1.19571304818625 18.6079642663779 Average weighted-distance for final elimination is: 28.6471847304924 Final number of output spheres is: 120 Number of polar spheres: 41 Number of nonpolar spheres: 43 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0