usefragsph not on There are 38 ligand heavy atoms Ligand center of coords (x y z): 19.6827105263158 -0.680763157894737 17.1627368421053 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 1238 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 683 WARNING: removing a crystallographic sphere that is distance 27.6608201071479 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.6349545146974 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.5437793521514 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.0664731540701 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 27.1385198748937 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.1792151142848 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.2463835604069 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 22.4269130064751 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 21.0225009929837 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 23.4962660863381 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 22.1705811606282 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.8023310162142 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.3928743235499 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 31.3962357775578 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.9176773195256 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.1995495396247 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.1534699163495 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.7571304884686 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 21.1538501932863 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 23.4060582969453 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 30.8715400652446 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 30.4971281598776 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 31.3931978141762 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.3437012965149 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.797804926001 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.1623527715514 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.2150249689771 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 20.0926950158509 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 26.9360051975047 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.9853836272329 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.6358069484237 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 28.6668240829011 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 25.8983281699804 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.634137898453 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 30.5648988383734 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 31.4282540717743 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 29.1615992188357 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 24.7272796117972 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 0 Number of spheres polar: 0, nonpolar: 0, out of current total: 0 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 1 Number of spheres after second pass removing spheres absolutely <0.5 from each other: 1 Crystallographic spheres are present, so doing continuity based on crystallographic spheres Only 0 spheres are continuous, so increasing continuity by 0.5 to be 3.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 4.5 Only 0 spheres are continuous, so increasing continuity by 0.5 to be 5 After continuity checking, number of spheres is: 0 Final number of output spheres is: 0 Number of polar spheres: 0 Number of nonpolar spheres: 0 Number of spheres that are near neither polar nor nonpolar receptor atoms: 0 Final number of spheres that are from crystallographic ligand: 0