There are 54 ligand heavy atoms Ligand center of coords (x y z): -8.87231481481481 15.7608518518519 28.2052407407407 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1333 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 971 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 969 Number of spheres polar: 226, nonpolar: 472, out of current total: 969 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -20.82562 3.12593 3.76770 27.64168 16.20526 40.09853 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 379 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 306 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -8.87231481481481 15.7608518518519 28.2052407407407 Center point: 85 xyz: -8.12408 15.28091 28.23754 After continuity checking, number of spheres is: 248 Spheres center of coords (x y z): -8.09444197580645 13.5091182258065 27.9828168548387 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.7735167567568 20.3888567567568 27.8586918918918 Average weighted-distance for final elimination is: 28.8735980698483 Final number of output spheres is: 120 Number of polar spheres: 44 Number of nonpolar spheres: 60 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 0