There are 40 ligand heavy atoms Ligand center of coords (x y z): -9.387225 16.309125 27.843625 useligsph not on Starting number of spheres from sph/sph cluster 0: 1194 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 792 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 790 Number of spheres polar: 138, nonpolar: 439, out of current total: 790 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.19392 2.57467 4.35054 27.97762 15.95683 39.83905 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 305 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 250 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -9.387225 16.309125 27.843625 Center point: 158 xyz: -9.72748 16.36375 27.75089 After continuity checking, number of spheres is: 212 Spheres center of coords (x y z): -8.2706070754717 14.5137549056604 28.4411343867925 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.8848094462541 20.5378333333333 27.9175792616721 Average weighted-distance for final elimination is: 27.9242657514075 Final number of output spheres is: 120 Number of polar spheres: 32 Number of nonpolar spheres: 59 Number of spheres that are near neither polar nor nonpolar receptor atoms: 29 Final number of spheres that are from crystallographic ligand: 0