usefragsph not on
There are 40 ligand heavy atoms
Ligand center of coords (x y z): -9.387225 16.309125 27.843625
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1194
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 628
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 626
Number of spheres polar: 97, nonpolar: 367, out of current total: 626
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -19.16599 0.59319 6.37659 26.10151 17.98473 37.82881
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 344
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 309
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 303
Spheres center of coords (x y z): -8.34582458745875 15.2563368646865 28.1992576237624
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.87600884869047
Final number of output spheres is: 60
Number of polar spheres: 13
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 40