Enabling DOCK Developer Scripts incl Database Preparation
Intel/Linux
inactives
we got past inactivesDB.ism
actives
we got past actives.ism
node-6-14.c.bkslab.org
du2 starts
1 molecule processed, 0 errors

convert.py (MDL SDF -> Isomeric SMILES):
	mols in: 4	mols out: 4

Total: 4 mols processed.
mol2nam v1.9  Structure to Name Conversion
OpenEye Scientific Software, February 2009


convert.py (Tripos MOL2 -> Isomeric SMILES):
	mols in: 4	mols out: 4

Total: 4 mols processed.
mid: No such file or directory.
hi: No such file or directory.
lo: No such file or directory.
mid: No such file or directory.
first try already in
then inzinc
count is 0
bzcat: Can't open input file 41: No such file or directory.
bzcat: Can't open input file 83: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 10: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 39: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 63: No such file or directory.

convert.py (Tripos MOL2 -> MDL SDF):
	mols in: 4	mols out: 4

Total: 4 mols processed.
count is 0
nothing to compress
bzcat: Can't open input file 41: No such file or directory.
bzcat: Can't open input file 83: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 10: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 39: No such file or directory.
bzcat: Can't open input file 43: No such file or directory.
bzcat: Can't open input file 63: No such file or directory.
nothing to compress
du2.csh script updated
ligand processing
MakeDOCK 2.0, modified by J.Irwin and M.Mysinger.
Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang
Using scripts in /raid5/people/mysinger/xyz/dockenv.
make: *** No rule to make target `rec.pdb', needed by `rec.ms'.  Stop.
Grid preparation completed normally.
Stop before docking.