usefragsph not on
There are 59 ligand heavy atoms
Ligand center of coords (x y z): 28.9694406779661 0.295254237288136 17.0063728813559
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1531
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 926
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 925
Number of spheres polar: 288, nonpolar: 435, out of current total: 925
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 16.64600 38.96183 -9.69206 10.14513 7.01006 26.62848
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 333
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 268
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 59
Spheres center of coords (x y z): 28.9694406779661 0.295254237288136 17.0063728813559
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.68348933641599
WARNING: removing a crystallographic sphere since 59>45 max spheres are present
WARNING: removing a crystallographic sphere since 58>45 max spheres are present
WARNING: removing a crystallographic sphere since 57>45 max spheres are present
WARNING: removing a crystallographic sphere since 56>45 max spheres are present
WARNING: removing a crystallographic sphere since 55>45 max spheres are present
WARNING: removing a crystallographic sphere since 54>45 max spheres are present
WARNING: removing a crystallographic sphere since 53>45 max spheres are present
WARNING: removing a crystallographic sphere since 52>45 max spheres are present
WARNING: removing a crystallographic sphere since 51>45 max spheres are present
WARNING: removing a crystallographic sphere since 50>45 max spheres are present
WARNING: removing a crystallographic sphere since 49>45 max spheres are present
WARNING: removing a crystallographic sphere since 48>45 max spheres are present
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 45