usefragsph not on
There are 46 ligand heavy atoms
Ligand center of coords (x y z): 13.178652173913 22.9214782608696 5.55165217391304
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1377
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 975
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 975
Number of spheres polar: 217, nonpolar: 563, out of current total: 975
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.18623 23.17212 13.19346 30.70110 -4.33687 15.45863
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 529
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 467
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 454
Spheres center of coords (x y z): 13.2284585682819 21.3558073348018 6.5448886784141
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.779102019691
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 46