There are 50 ligand heavy atoms Ligand center of coords (x y z): 12.97872 22.87324 5.6249 useligsph not on Starting number of spheres from sph/sph cluster 0: 1223 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 991 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 991 Number of spheres polar: 247, nonpolar: 509, out of current total: 991 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.98500 24.94569 11.00687 34.83736 -6.36941 17.56124 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 376 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 302 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 12.97872 22.87324 5.6249 Center point: 28 xyz: 13.09150 22.80431 6.16673 After continuity checking, number of spheres is: 250 Spheres center of coords (x y z): 12.37717672 20.49785316 7.43052844 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 15.6464495661605 26.4040254880694 3.67260629067244 Average weighted-distance for final elimination is: 29.1277855411156 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 58 Number of spheres that are near neither polar nor nonpolar receptor atoms: 14 Final number of spheres that are from crystallographic ligand: 0