usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 18.6353902439024 -2.81185365853658 -3.89709756097561
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1214
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 716
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 716
Number of spheres polar: 175, nonpolar: 350, out of current total: 716
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.84757 28.58844 -12.80810 7.16749 -13.84847 6.08116
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 275
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 224
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 204
Spheres center of coords (x y z): 18.0668451960784 -2.94030745098039 -2.42137632352941
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.01828838126299
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 41