usefragsph not on
There are 42 ligand heavy atoms
Ligand center of coords (x y z): -9.346 16.240880952381 27.858880952381
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1452
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 653
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 652
Number of spheres polar: 109, nonpolar: 336, out of current total: 652
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -19.32241 0.64543 6.35055 26.21255 17.92426 37.84986
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 243
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 215
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 200
Spheres center of coords (x y z): -8.3005586 15.77978625 27.88874955
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.82479094714291
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 42