SMILIN filter done 0 filterlog.txt 1 Done. 1 toadd.ism 0 inzinc.ism 1 total 20Too many epik licenses checked out... Waiting! 1 1 Done. 1 Done. 1 Done. Your job-array 2699803.1-1:1 ("subprepGQ.csh") has been submitted Your job-array 2699804.1-1:1 ("subprepGQ.csh") has been submitted Waiting for jobs....! now loading ref expecting to find 1 to load catalog 21 Protonation model 0 (ref) end of startup phase... ======># 0 pname TEMP00000001.mol2 /raid3/people/mysinger/pxc/dude/species/hivpr/Q72874/blasti/2whh/dock/ligx/ref/TEMP00000001.mol2 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Substance 70641766 debug smiles c1cc(ccc1C/C(=C/[O-])/[NH3+])[N+](=O)[O-] case 1. num rows 1 panic - subid 68711360 also for this sub_id 70641766 s prot_id 105454016 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Prot id 105454016 load_databaseH.pl completed normally. now loading mid expecting to find 3 to load catalog 21 Protonation model 1 (mid) end of startup phase... ======># 0 pname TEMP00000001.mol2 /raid3/people/mysinger/pxc/dude/species/hivpr/Q72874/blasti/2whh/dock/ligx/mid/TEMP00000001.mol2 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Substance 70641766 debug smiles c1cc(ccc1C[C@@H](C=O)N)[N+](=O)[O-] case 1. num rows 1 panic - subid 68711360 also for this sub_id 70641766 s prot_id 105454128 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Prot id 105454128 ======># 1 pname TEMP000000011.mol2 /raid3/people/mysinger/pxc/dude/species/hivpr/Q72874/blasti/2whh/dock/ligx/mid/TEMP000000011.mol2 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Substance 70641766 debug smiles c1cc(ccc1C[C@@H](C=O)[NH3+])[N+](=O)[O-] case 1. num rows 1 panic - subid 68711360 also for this sub_id 70641766 s prot_id 105454196 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Prot id 105454196 ======># 2 pname TEMP0000000111.mol2 /raid3/people/mysinger/pxc/dude/species/hivpr/Q72874/blasti/2whh/dock/ligx/mid/TEMP0000000111.mol2 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Substance 70641766 debug smiles c1cc(ccc1C/C(=C/[O-])/N)[N+](=O)[O-] case 1. num rows 1 panic - subid 68711360 also for this sub_id 70641766 s prot_id 105454285 we are in do_cat_item with dbcode PPN_A2201_2WHH stereomer 0 subid 70641766 cat_id 21 already existed PPN_A2201_2WHH-70641766-21 Prot id 105454285 load_databaseH.pl completed normally. now loading hi nothing to load - move along now loading lo nothing to load - move along