Enabling DOCK Developer Scripts incl Database Preparation
Intel/Linux
inactives
we got past inactivesDB.ism
actives
we got past actives.ism
node-5-17.c.bkslab.org
du2 starts
CC123CC145([C@@]26[C@]4([NH2+]6)O)N378C59(C7123C456C897(N1414N5589C11%10(C4545C11%11%12%13C%1044%10%14O51O%114C%12%1014C%13%145%10N11%11%12N4545C11(C44%13%14%15C5115(C44(N%1311C44%13C11%16([C@@]44C%1311([C@@H]%16[NH2+]1)O4)C)NC(=O)c1ccc4ccccc4n1)[O+]%14[O+]%155)CC145%13[C@]%14%15C11%16C4%144%14[C@@]%15%15[C@@]44C%14%15%14C44%15C5115%17[C@]%144C%15114C%135%16C%171%11[C@]4%10%12)[C@@]81C945C1189C44%10C5115[C@@]88[C@@H]9[C@]9%11[C@@]88[C@@]99C%1188C141[C@]89C51%10C6)[O+]2[O+]37)NC(=O)c1ccc2ccccc2n1	1	Strange valence
1 molecule processed, 1 errors
first try already in
then inzinc
count is 0
nothing to compress
count is 0
nothing to compress
nothing to compress
nothing to compress
du2.csh script updated
ligand processing
MakeDOCK 2.0, modified by J.Irwin and M.Mysinger.
Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang
Using scripts in /raid5/people/mysinger/xyz/dockenv.
make: *** No rule to make target `rec.pdb', needed by `rec.ms'.  Stop.
Grid preparation completed normally.
Stop before docking.