There are 42 ligand heavy atoms Ligand center of coords (x y z): 40.3984523809524 18.1925714285714 65.0449285714286 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1232 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 983 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 979 Number of spheres polar: 210, nonpolar: 553, out of current total: 979 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.40183 52.34327 6.21838 30.11281 53.14485 77.02883 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 387 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 300 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 40.3984523809524 18.1925714285714 65.0449285714286 Center point: 176 xyz: 40.41335 17.92950 64.95985 After continuity checking, number of spheres is: 232 Spheres center of coords (x y z): 40.0251022844827 19.0273461637931 65.9136205603448 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 45.6403331539289 16.5954779332616 67.2461555435954 Average weighted-distance for final elimination is: 27.5308872557151 Final number of output spheres is: 120 Number of polar spheres: 33 Number of nonpolar spheres: 77 Number of spheres that are near neither polar nor nonpolar receptor atoms: 10 Final number of spheres that are from crystallographic ligand: 0