There are 40 ligand heavy atoms Ligand center of coords (x y z): 12.916125 23.038125 5.56215 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1151 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 943 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 943 Number of spheres polar: 248, nonpolar: 424, out of current total: 943 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.94853 24.77186 11.33668 34.95768 -6.31233 17.53377 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 355 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 293 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 12.916125 23.038125 5.56215 Center point: 25 xyz: 13.32551 22.95227 5.99700 After continuity checking, number of spheres is: 247 Spheres center of coords (x y z): 11.6970759109312 21.09962951417 7.51434522267207 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 15.8212261388286 26.571237527115 3.65835195227766 Average weighted-distance for final elimination is: 29.6968125332301 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 44 Number of spheres that are near neither polar nor nonpolar receptor atoms: 28 Final number of spheres that are from crystallographic ligand: 0