There are 62 ligand heavy atoms Ligand center of coords (x y z): -9.16266129032258 15.8275 27.8642580645161 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1505 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 963 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 962 Number of spheres polar: 179, nonpolar: 498, out of current total: 962 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.16059 2.80826 3.90875 27.72169 15.86678 39.78857 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 385 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 291 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -9.16266129032258 15.8275 27.8642580645161 Center point: 28 xyz: -9.26187 16.96350 27.81761 After continuity checking, number of spheres is: 260 Spheres center of coords (x y z): -7.92738773076923 13.7320389230769 28.595605 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.9194642470206 20.5946868905742 27.920036836403 Average weighted-distance for final elimination is: 29.899128839821 Final number of output spheres is: 120 Number of polar spheres: 34 Number of nonpolar spheres: 52 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0