There are 40 ligand heavy atoms Ligand center of coords (x y z): -9.387225 16.309125 27.843625 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1194 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 792 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 790 Number of spheres polar: 137, nonpolar: 418, out of current total: 790 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.19392 2.57467 4.35054 27.97762 15.95683 39.83905 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 305 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 251 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -9.387225 16.309125 27.843625 Center point: 159 xyz: -9.72748 16.36375 27.75089 After continuity checking, number of spheres is: 213 Spheres center of coords (x y z): -8.2459455399061 14.5345069953052 28.4309151173709 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.854125 20.4204166666667 27.8941359649123 Average weighted-distance for final elimination is: 27.8880480780673 Final number of output spheres is: 120 Number of polar spheres: 33 Number of nonpolar spheres: 59 Number of spheres that are near neither polar nor nonpolar receptor atoms: 28 Final number of spheres that are from crystallographic ligand: 0