There are 59 ligand heavy atoms Ligand center of coords (x y z): 28.9694406779661 0.295254237288136 17.0063728813559 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1531 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1129 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1127 Number of spheres polar: 348, nonpolar: 502, out of current total: 1127 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.00354 40.96804 -11.68345 12.05083 5.08767 28.98279 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 450 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 347 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 28.9694406779661 0.295254237288136 17.0063728813559 Center point: 168 xyz: 30.00468 1.10040 17.27519 After continuity checking, number of spheres is: 307 Spheres center of coords (x y z): 27.8635845602606 -1.15576416938111 17.2256635179153 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 30.7475882996174 5.99313668671405 17.9961071623838 Average weighted-distance for final elimination is: 30.3389605597138 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 61 Number of spheres that are near neither polar nor nonpolar receptor atoms: 11 Final number of spheres that are from crystallographic ligand: 0