usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): -9.132 16.437 27.6110454545455
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1077
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 635
WARNING: removing a crystallographic sphere that is distance 1.12950387338867 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 627
Number of spheres polar: 204, nonpolar: 284, out of current total: 627
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -18.25904 0.80605 6.44298 26.23150 17.62289 36.98060
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 294
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 259
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 222
Spheres center of coords (x y z): -8.4365286036036 14.5800475675676 28.1225092342342
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.75219083117105
Final number of output spheres is: 60
Number of polar spheres: 33
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 21