There are 46 ligand heavy atoms
Ligand center of coords (x y z): 5.97026086956522 0.328391304347826 12.1961304347826
useligsph flag does not exist.
Starting number of spheres from sph/sph cluster 0: 1332
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1078
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1078
Number of spheres polar: 334, nonpolar: 439, out of current total: 1078
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.01337 17.92427 -11.63228 12.28796 0.51495 24.18513
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 409
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 325
No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 5.97026086956522 0.328391304347826 12.1961304347826
Center point: 242 xyz: 5.81975 0.59957 12.83985
After continuity checking, number of spheres is: 298
Spheres center of coords (x y z): 6.44407426174496 -0.00872563758389299 10.4221893959732
Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres
Receptor center of coords (x y z): 5.01163665943601 1.20776789587852 18.5824831887202
Average weighted-distance for final elimination is: 29.3284309452217
Final number of output spheres is: 120
Number of polar spheres: 43
Number of nonpolar spheres: 53
Number of spheres that are near neither polar nor nonpolar receptor atoms: 24
Final number of spheres that are from crystallographic ligand: 0