usefragsph not on
There are 50 ligand heavy atoms
Ligand center of coords (x y z): 10.78288 23.12984 3.858
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1480
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 960
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 960
Number of spheres polar: 165, nonpolar: 572, out of current total: 960
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.82005 20.74100 13.16832 33.12746 -5.97645 13.85289
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 526
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 457
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 438
Spheres center of coords (x y z): 10.5060431050228 22.0109553196347 4.86834136986301
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.7274199738519
Final number of output spheres is: 60
Number of polar spheres: 13
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 50