There are 54 ligand heavy atoms Ligand center of coords (x y z): -9.18683333333333 15.9270555555556 27.8862777777778 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1297 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 906 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 906 Number of spheres polar: 165, nonpolar: 478, out of current total: 906 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -21.16881 2.71045 3.98553 27.80031 15.93909 39.83666 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 364 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 281 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -9.18683333333333 15.9270555555556 27.8862777777778 Center point: 177 xyz: -9.52432 16.45253 27.89558 After continuity checking, number of spheres is: 255 Spheres center of coords (x y z): -8.93734054901961 14.9570669803922 28.8894043137255 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): -11.8914668117519 20.4635973884657 27.9058416757344 Average weighted-distance for final elimination is: 28.9947659535562 Final number of output spheres is: 120 Number of polar spheres: 29 Number of nonpolar spheres: 63 Number of spheres that are near neither polar nor nonpolar receptor atoms: 28 Final number of spheres that are from crystallographic ligand: 0