There are 45 ligand heavy atoms Ligand center of coords (x y z): 20.8072666666667 30.9510444444444 13.8617333333333 useligsph flag does not exist. Starting number of spheres from sph/sph cluster 0: 1398 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1091 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1090 Number of spheres polar: 262, nonpolar: 545, out of current total: 1090 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.86104 32.67587 18.99403 42.90594 1.92400 25.80007 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 405 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 338 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 20.8072666666667 30.9510444444444 13.8617333333333 Center point: 30 xyz: 19.72266 30.99873 14.48148 After continuity checking, number of spheres is: 294 Spheres center of coords (x y z): 19.9435865306122 32.4664042857143 11.4114204761905 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 20.6723110386079 28.0646498096791 18.1628499184339 Average weighted-distance for final elimination is: 30.2918966557846 Final number of output spheres is: 120 Number of polar spheres: 40 Number of nonpolar spheres: 64 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 0