usefragsph not on
There are 54 ligand heavy atoms
Ligand center of coords (x y z): 15.8984814814815 21.9959259259259 17.2865
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1513
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 968
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 968
Number of spheres polar: 218, nonpolar: 537, out of current total: 968
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.90685 25.89013 12.02347 30.50100 7.28748 27.14122
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 315
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 252
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 54
Spheres center of coords (x y z): 15.8984814814815 21.9959259259259 17.2865
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.55750225457645
WARNING: removing a crystallographic sphere since 54>45 max spheres are present
WARNING: removing a crystallographic sphere since 53>45 max spheres are present
WARNING: removing a crystallographic sphere since 52>45 max spheres are present
WARNING: removing a crystallographic sphere since 51>45 max spheres are present
WARNING: removing a crystallographic sphere since 50>45 max spheres are present
WARNING: removing a crystallographic sphere since 49>45 max spheres are present
WARNING: removing a crystallographic sphere since 48>45 max spheres are present
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 45