usefragsph not on
There are 47 ligand heavy atoms
Ligand center of coords (x y z): 19.9596808510638 29.2200212765957 12.8870425531915
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1390
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 875
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 875
Number of spheres polar: 187, nonpolar: 429, out of current total: 875
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.07084 29.94966 19.23849 39.21224 2.89067 22.84216
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 499
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 440
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 428
Spheres center of coords (x y z): 19.6895437383177 29.7904423598131 12.2915239252336
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.48749300276155
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 47