usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -0.6252 -34.79775 24.51415
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1799
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 799
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 799
Number of spheres polar: 264, nonpolar: 442, out of current total: 799
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.62216 9.36767 -44.71253 -24.87800 14.51600 34.33191
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 254
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 204
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 137
Spheres center of coords (x y z): 2.80636518248175 -37.548199270073 21.206973649635
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.98598173019598
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 20