usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -0.4753 -34.2851 24.403
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1636
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 829
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 829
Number of spheres polar: 273, nonpolar: 461, out of current total: 829
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.47495 9.52331 -44.27895 -24.29351 14.40606 34.35086
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 242
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 183
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 123
Spheres center of coords (x y z): 2.49085447154472 -36.8005682113821 20.7471511382114
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.78463587921127
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 20