usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -2.90985185185185 -35.3378888888889 24.5153333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1753
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 890
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 890
Number of spheres polar: 316, nonpolar: 527, out of current total: 890
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.89464 7.06195 -45.22743 -25.40604 14.51748 34.51361
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 445
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 366
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 299
Spheres center of coords (x y z): -3.54097070234114 -38.5298448160535 22.4944732441472
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.354642423633
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 27