usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -3.09111111111111 -35.2394074074074 24.0007777777778
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1844
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 859
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 859
Number of spheres polar: 265, nonpolar: 535, out of current total: 859
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.07335 6.90695 -45.05941 -25.26337 14.03042 33.99792
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 257
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 204
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 165
Spheres center of coords (x y z): -3.01962393939394 -37.5208946060606 22.5001404242424
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.30880862909304
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 27