usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 1.5733 -36.6803 22.29795
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1762
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 781
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 781
Number of spheres polar: 302, nonpolar: 423, out of current total: 781
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.40924 11.56275 -46.62956 -26.75256 12.31050 32.22987
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 218
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 174
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 103
Spheres center of coords (x y z): 4.36744601941748 -38.8274241747572 19.7624539805825
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.20548817012223
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 20